Software List
This page contains a list of currently installed software packages on Opuntia.
Software Modules
| Name | Version |
|---|---|
| abaqus | 6.12 |
| ansys | 16.2 |
| ansys | 17.2(default) |
| ansys | 18.0 |
| ase | 3.8.1 |
| bcftools | 1.2 |
| bedops | 2.4.14 |
| bedtools | 2.24 |
| caffe | 06242015 |
| caffe | 11252015(default) |
| canopy | 1.4.1 |
| cif2cell | 1.2.10 |
| cmake | 2.8.12 |
| cmake | 3.0.2(default) |
| cuda-toolkit | 6.5(default) |
| cuda-toolkit | 7.0 |
| cuda-toolkit | 7.5 |
| cuda-toolkit | 8.0 |
| DynamO | |
| eHtuner | |
| esio | 0.1.9 |
| fftw | 3.3.4 |
| forcebalance | 1.3.1 |
| gaussian09 | d.01 |
| gaussian09 | e.01 |
| gaussian16 | a.03 |
| gaussian16 | a.03-GPU |
| gcc | 4.9.2(default) |
| gcc | 5.4.0 |
| gdb | 7.12.1 |
| gpaw | 0.10.0 |
| intel | ics-2015-32-bit |
| intel | ics-2015-64-bit(default) |
| intel | psxe-2016-32-bit |
| intel | psxe-2016-64-bit |
| lammps | 28Jun14 |
| lammps | 9Dec14(default) |
| libmatheval | |
| matlab | r2014a |
| matlab | r2014b |
| matlab | r2015b |
| matlab | r2016b(default) |
| matlab | r2017a |
| nwchem-tce-cuda | 6.5.revision26243 |
| OpenMM | 6.3.0 |
| openmpi | 1.10.1-intel |
| openmpi | 1.10.2-intel |
| openmpi | 1.10.2-intel2016 |
| openmpi | 1.10.5 |
| openmpi | 1.10.7-intel |
| openmpi | 1.8.3(default) |
| openmpi | 1.8.3-gcc4.9.2 |
| openmpi | 1.8.3-intel |
| p4vasp | 0.3.29 |
| pgi | 14.9-64-bit |
| pgi | 15.7-64-bit(default) |
| pgi | 16.5-64-bit |
| phonopy | 1.10.0 |
| phonopy | 1.11.2 |
| phonopy | 1.9.2-rc5 |
| phonopy | 1.9.7(default) |
| povray | |
| PWgui | 5.2 |
| pypar | |
| python | 2.6-extra |
| python | 2.7 |
| rstudio | 0.99 |
| samtools | 1.2 |
| singularity | 2.4.1 |
| VESTA | 3.2.1 |
| wxDragon | |
| XCrySDen | 1.5.60 |
| YAeHMOP | |
| amber | 12 |
| amber | 14(default) |
| amber-tools | 16 |
| autodock | 4.2.6 |
| autodock-vina | 1.12 |
| bbcp | 14.09 |
| beagle-lib | git |
| bigdft | 1.7.6 |
| blast | 2.2.31 |
| boost | 1.57 |
| boost | 1.60(default) |
| boost | 1.65.1 |
| bowtie2 | 2.2.4 |
| caffe | 9282017 |
| cgns | 3.3.0 |
| charmm | 39b2 |
| cmake | 3.6.3(default) |
| cmake | 3.7.2 |
| cp2k | 2.6.1 |
| cp2k | 3.0 |
| cuda-toolkit | 5.5 |
| cuda-toolkit | 7.0.4 |
| cuda-toolkit | 7.5-cudnn-5.1 |
| dl_poly | 1.9 |
| dssp | 2.0.4 |
| eigen | 3.2.3 |
| eigen | 3.3.4(default) |
| ESPResSo | 3.3.1(default) |
| ESPResSo | 3.3.1-gpu |
| espressopp | 1.9.3 |
| etsf_io | 1.0.4 |
| Farsight | 0.4.4 |
| fenics | 1.4.0 |
| ff++ | 3.47 |
| ffmpeg | 3.1.1 |
| ffmpeg | 3.3(default) |
| firefly | 8.2.0 |
| firefox | 31 |
| freeglut | 3.10.0 |
| geant4 | 4.10.00.p02 |
| geant4 | 4.10.03.p01 |
| geant4p04 | 4.10.00.p04 |
| geos | 3.6.1 |
| glibc | 2.20 |
| glpk | 4.6 |
| g_mmpbsa | gromacs_4.6.7 |
| g_mmpbsa | gromacs_5.1.4 |
| gnutools | 2014 |
| grace | 5.1.25 |
| gromacs | 2016 |
| gromacs | 4.6.3 |
| gromacs | 4.6.3-gpu |
| gromacs | 4.6.7(default) |
| gromacs | 4.6.7-gpu |
| gromacs | 5.0.7 |
| gromacs | 5.0.7-gpu |
| gromacs | 5.1.2 |
| gromacs | 5.1.2-gpu |
| gromacs | 5.1.2-plumed |
| gromacs | 5.1.2-plumed-gpu |
| gromacs | 5.1.3 |
| gromacs | 5.1.4 |
| gsl | 1.16 |
| gstreamer | 1.10 |
| hdf5 | 1.8.17 |
| htop | 1.0.2 |
| htop | 2.0.2 |
| hwloc | 1.10.0 |
| imagemagick | 6.5.9 |
| intellib | ics-2015 |
| intellib | ics-2016(default) |
| intelmpi | 5.0.2 |
| intelmpi | 5.1.1(default) |
| iq-tree | 46107c50c5 |
| ITK | 4.11.0(default) |
| ITK | 4.7.1 |
| ITK | 4.8.2 |
| java | jdk1.8.0_91 |
| lammps | 10Aug15 |
| lapack | 3.5.0 |
| libxc | 2.0.0 |
| madagascar | 1.7 |
| mgltools | 1.5.6 |
| mgltools | latest(default) |
| mopac | 2012-gpu |
| mopac | 2016 |
| mpich | 3.1.3 |
| mpich | 3.1.3-mxm(default) |
| mpich | 3.2 |
| mrbayes | 3.2.6 |
| mumps | 4.8.4(default) |
| mumps | 5.0.2 |
| mvapich | 2.1 |
| namd | 2.10(default) |
| namd | 2.10CVS |
| nek5000 | 23may16 |
| netcdf | 4.1.3 |
| netcdf | 4.3.2(default) |
| netcdff | 4.4.1 |
| nwchem | 6.3 |
| nwchem | 6.5 |
| octopus | 4.1.2 |
| openbabel | 2.3.2 |
| opencv | 3.3.0 |
| opencv | 3.3.0-cuda8 |
| opencv-old | 2.4.13 |
| OpenFOAM | 2.3.1 |
| OpenFOAM | 3.0.0 |
| OpenFOAM | 4.0(default) |
| OpenFOAM | 4.1 |
| OpenFOAM | 5.0 |
| openmm | 6.2 |
| openmpi | 2.1 |
| papi | 5.4.0(default) |
| papi | 5.4.1 |
| paraview | 4.3.1 |
| parmetis | 4.0.3 |
| pdt | 3.20 |
| perl | 5.22 |
| petsc | 3.5.2 |
| pfft | git |
| plumed | 2.2.3 |
| protobuf | 3.4.0 |
| python | 2.7-gcc |
| python | 2.7-intel |
| python | 2.7-miniconda |
| python | 3.5-gcc |
| python | 3.6-gcc |
| python | 3.6-miniconda |
| qt | 4.8.4 |
| quantum-espresso | 5.1(default) |
| quantum-espresso | 5.2 |
| quantum-espresso | 5.4 |
| R | 3.1.2(default) |
| R | 3.2.3 |
| R | 3.3.2 |
| R | 3.4.0 |
| ROOT | 5.34.32 |
| ROOT | 6.08.06 |
| ROOT | 6.09.02 |
| rosetta | 3.8 |
| shogun | git |
| slepc | 3.5.3 |
| sqlite | 3080803 |
| suitsparse | 4.4.2 |
| tau | 2.24.1 |
| t-coffee | 11.00 |
| tensorflow | git-py2.7 |
| tensorflow | git-py3.5 |
| tophat | 2.0.13 |
| torch | 7 |
| torch-lua | 7 |
| toy2dac | 2.3 |
| trilinos | 11.2.1 |
| valgrind | 3.10.1 |
| viennaRna | 2.1.9 |
| vmd | 1.9.2 |
| vmd | 1.9.3(default) |
| votca | git |
| votca | git-gromacs-5.0.6 |
| xerces-c | 3.1.4 |
| xmgrace | 5.1.25 |